Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_22ANN10150.339675United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10160.35685United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10170.39204United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10180.4007625United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10190.3672625United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10200.3602125United StatesColorado39.00672-108.46384
Helianthus annuusANN_23ANN10210.3673375United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10220.3924United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10230.355833333United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10240.39015United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10250.354475United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10260.370375United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10290.3797875United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10300.3633United StatesNevada40.66257-116.23876
Helianthus annuusANN_24ANN10310.3650875United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10320.353425United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10330.360275United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10340.38205United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10350.3804625United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10360.3886875United StatesNevada39.48892-119.99511
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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