Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_19ANN09860.3820875United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09870.3226375United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09880.37065United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_20ANN09910.374483333United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09920.37385United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09960.3605625United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09970.354525United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09980.3357375United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09990.357175United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN10000.3439125United StatesColorado38.44366-107.62928
Helianthus annuusANN_21ANN10010.3731125United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10020.3705875United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10030.3969625United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10070.3905United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10080.3473625United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10090.3696125United StatesColorado38.91004-108.3738
Helianthus annuusANN_22ANN10110.359675United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10120.3863125United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10130.3912125United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10140.3966125United StatesColorado39.00672-108.46384
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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