Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_24ANN10370.3988United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10380.351725United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10390.3831United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10400.374375United StatesNevada39.48892-119.99511
Helianthus annuusANN_25ANN10450.3991625United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10460.3444625United StatesNevada36.79654-114.09841
Helianthus annuusANN_26ANN10510.3784875United StatesUtah37.13733-113.51348
Helianthus annuusANN_27ANN10610.3993375United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10620.3271625United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10680.360925United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10690.3636United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10700.3933625United StatesUtah37.13137-112.56561
Helianthus annuusANN_28ANN10710.3773875United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10720.3573375United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10730.3382625United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10750.3340375United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10760.3465125United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10770.3528125United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10780.3275375United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10790.36825United StatesUtah38.21652-112.64767
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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