Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_13ANN09290.36665United StatesArizona34.75056-112.01697
Helianthus annuusANN_14ANN09310.3946625United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09320.3911375United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09330.3763United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09340.3358United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09390.364075United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09400.384025United StatesArizona36.1086-111.24184
Helianthus annuusANN_15ANN09430.3466625United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09440.3509125United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09470.4072625United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09480.3646625United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09490.3430875United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09500.3771625United StatesArizona35.03852-110.7351
Helianthus annuusANN_16ANN09510.399075United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09520.337975United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09530.3788875United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09540.39665United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09550.3879625United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09560.36125United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09570.37115United StatesNew Mexico35.40041-108.23557
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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