Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_10ANN08930.372525United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08940.3997125United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08970.3698875United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08980.3736625United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_11ANN09010.39545United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09020.386625United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09030.391633333United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09070.339983333United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09080.3956United StatesArizona35.19566-114.06666
Helianthus annuusANN_12ANN09110.381275United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09120.364175United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09130.3746875United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09140.380225United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09190.338025United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09200.3501625United StatesArizona35.2533-112.13355
Helianthus annuusANN_13ANN09210.3638625United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09220.394225United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09230.36485United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09240.35206United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09270.3744375United StatesArizona34.75056-112.01697
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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