Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_44ANN12390.345757143United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12400.3452United StatesTexas29.05186-99.01808
Helianthus annuusANN_45ANN12410.3537375United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12420.3218625United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12430.3559United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12440.358025United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12470.383175United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12480.3662125United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12490.3363625United StatesTexas28.63085-100.1189
Helianthus annuusANN_45ANN12500.3456United StatesTexas28.63085-100.1189
Helianthus annuusANN_46ANN12510.394633333United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12520.3486United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12530.3336United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12540.3588125United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12550.3418875United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12560.3362375United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12570.3649875United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12580.3544875United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12590.355975United StatesCalifornia33.92321-116.86432
Helianthus annuusANN_46ANN12600.3584375United StatesCalifornia33.92321-116.86432
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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