Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_47ANN12630.3259875United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12640.3099125United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12650.356125United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12660.38195United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12670.3707375United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12680.3602125United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12690.3675United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12700.3649875United StatesArizona32.73158-111.53769
Helianthus annuusANN_50ANN12910.350775United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12920.3393375United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12940.364United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN13000.3386375United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_51ANN13020.322675United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_52ANN13110.4163United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13140.3829125United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13150.360675United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13160.3595375United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13170.3745125United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13180.3854125United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13190.3586United StatesTexas31.13312-104.02012
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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