Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN12150.3825United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12170.3942375United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12180.3653United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12190.387325United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12200.401942857United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN12210.366875United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12220.4152625United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12230.4004375United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12240.38435United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12260.3968United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12270.376775United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12280.384375United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12290.402United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12300.398975United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN12320.3561125United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12330.3521625United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12350.3999625United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12360.3523625United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12370.4058125United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12380.3345125United StatesTexas29.05186-99.01808
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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dominik.grimm [at] hswt.de

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