Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_37ANN11680.366625United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11690.3534375United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11700.403775United StatesColorado40.48679-105.09619
Helianthus annuusANN_38ANN11710.409325United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11720.3823875United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11750.3743875United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11760.3599625United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11780.4182375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11790.3829375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11800.387825United StatesKansas38.44118-98.63231
Helianthus annuusANN_40ANN11910.3997625United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11920.3774125United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11940.3991125United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11960.3474375United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11970.3826125United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11980.3834625United StatesKansas37.23327-98.66459
Helianthus annuusANN_42ANN12110.3719625United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12120.399575United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12130.386275United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12140.3963375United StatesTexas32.92224-97.36547
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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dominik.grimm [at] hswt.de

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