Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_35ANN11460.360525United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11470.3357125United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11480.3509125United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11490.362725United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11500.3670875United StatesUtah40.51274-109.51947
Helianthus annuusANN_36ANN11510.37195United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11520.3563125United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11530.362525United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11540.3606125United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11550.3379875United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11560.37645United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11570.3274625United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11580.355275United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11590.3681125United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11600.3688125United StatesWyoming41.77426-107.45885
Helianthus annuusANN_37ANN11630.3382125United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11640.351875United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11650.3663375United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11660.3510625United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11670.3545125United StatesColorado40.48679-105.09619
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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