Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_31ANN11090.3765375United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11100.357875United StatesUtah40.1781-111.65071
Helianthus annuusANN_32ANN11150.3810375United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11160.3715625United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11170.3375125United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11180.3665625United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11190.379625United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11200.3597875United StatesUtah41.48524-112.0556
Helianthus annuusANN_33ANN11230.384United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11240.373975United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11290.3559875United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11300.3939875United StatesUtah40.77115-112.15004
Helianthus annuusANN_34ANN11330.338825United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11350.3598125United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11360.395025United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11370.3679United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11380.393925United StatesUtah40.69149-112.26423
Helianthus annuusANN_35ANN11430.3582625United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11440.3411375United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11450.3602375United StatesUtah40.51274-109.51947
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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dominik.grimm [at] hswt.de

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