Details for Phenotype: Seed width widest pos (ID: 81)

Phenotype ID:
81
Name:
Seed width widest pos
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of the height at which the maximum width occurs to the Maximum Height.
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN10800.3732125United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN10840.4016625United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10850.4244375United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10860.3804875United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10890.3505United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10900.36415United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10910.400325United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10920.386325United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10930.394925United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10940.3837625United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10950.3738375United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10960.36095United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10970.3792375United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10980.3604125United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11010.370525United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11030.3678375United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11040.405375United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11050.344475United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11060.3874375United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11070.3548United StatesUtah40.1781-111.65071
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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