Details for Phenotype: Seed shape index external II (ID: 75)

Phenotype ID:
75
Name:
Seed shape index external II
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed shape
Type:
Quantitative
Ontology:
seed shape
Unit:
No unit available
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
The ratio of Height Midwidth to Width Mid-height
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_16ANN09582.7492875United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09592.187775United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09602.3561United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_17ANN09611.79725United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09621.6073United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09671.9886875United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09681.7741875United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09691.850325United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_17ANN09701.731825United StatesNew Mexico35.24503-107.68594
Helianthus annuusANN_18ANN09722.0923United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09751.8259625United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09761.8744875United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09771.91835United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09781.9433625United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_18ANN09801.9275875United StatesNew Mexico36.07308-104.28873
Helianthus annuusANN_19ANN09811.76855United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09822.09305United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09831.9681United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09841.975225United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09852.11075United StatesNew Mexico36.7268-104.01913
Publications
HeliantHOME is a public database for sunflower phenotypes (© 2021-2022) About | Imprint
Legal Notice
Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

Legal Information
Type of business: Research Institute

Disclaimer
This website provides information about public research data. We make no guarantees of accuracy, completeness and timeliness of the infomration on this website. We, therefore, accept no responsibility or liability for damages or losses resulting from the use of this website. This website provides links to other internet sites for the convenience of users. We are not responsible for the availability or content of these external sites, nor do they endorse, warrant, or guarantee any commercial product, service, site, law firm, attorney or information described or offered at these other internet sites.