Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_22ANN10155.9817United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10165.6494375United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10175.13752United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10184.8978United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10194.89005United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10205.6982125United StatesColorado39.00672-108.46384
Helianthus annuusANN_23ANN10215.1919125United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10224.82365United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10235.549033333United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10245.277125United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10255.683975United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10265.6229875United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10295.3048625United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10306.04225United StatesNevada40.66257-116.23876
Helianthus annuusANN_24ANN10316.1698United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10326.53345United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10335.1691United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10345.9296United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10354.9429875United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10366.6242United StatesNevada39.48892-119.99511
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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