Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_19ANN09865.99315United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09875.2353375United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_19ANN09884.9957875United StatesNew Mexico36.7268-104.01913
Helianthus annuusANN_20ANN09914.928916667United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09924.85835United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09964.8472United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09974.9463375United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09985.3922375United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN09995.023725United StatesColorado38.44366-107.62928
Helianthus annuusANN_20ANN10004.956975United StatesColorado38.44366-107.62928
Helianthus annuusANN_21ANN10015.2761125United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10025.8977375United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10035.2430125United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10074.8046875United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10085.2090875United StatesColorado38.91004-108.3738
Helianthus annuusANN_21ANN10095.58295United StatesColorado38.91004-108.3738
Helianthus annuusANN_22ANN10115.6141United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10125.6738625United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10135.8488625United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10145.638875United StatesColorado39.00672-108.46384
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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