Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_24ANN10375.0345875United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10385.4324625United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10396.0708625United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10405.5680125United StatesNevada39.48892-119.99511
Helianthus annuusANN_25ANN10454.41565United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10465.14255United StatesNevada36.79654-114.09841
Helianthus annuusANN_26ANN10513.9521875United StatesUtah37.13733-113.51348
Helianthus annuusANN_27ANN10614.6586125United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10625.0217United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10684.5324375United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10695.1766United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10705.2683625United StatesUtah37.13137-112.56561
Helianthus annuusANN_28ANN10714.946475United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10725.0882625United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10735.408675United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10754.8067125United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10765.3605375United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10775.517875United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10785.3881875United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10795.29465United StatesUtah38.21652-112.64767
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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