Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_13ANN09295.2289625United StatesArizona34.75056-112.01697
Helianthus annuusANN_14ANN09314.44055United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09324.4222125United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09334.9501875United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09345.0148875United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09394.3017875United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09404.8567United StatesArizona36.1086-111.24184
Helianthus annuusANN_15ANN09436.1529United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09445.573575United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09475.54245United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09485.7595375United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09495.63775United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09505.55595United StatesArizona35.03852-110.7351
Helianthus annuusANN_16ANN09514.988675United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09525.41295United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09535.1335United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09544.98215United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09555.759875United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09565.4327375United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09575.0888125United StatesNew Mexico35.40041-108.23557
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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