Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_10ANN08934.5187875United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08944.123175United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08974.487725United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08985.022075United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_11ANN09015.583275United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09026.3219United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09035.087066667United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09075.868883333United StatesArizona35.19566-114.06666
Helianthus annuusANN_11ANN09086.16192United StatesArizona35.19566-114.06666
Helianthus annuusANN_12ANN09116.1637United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09125.112United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09134.9743625United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09145.5278125United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09195.91785United StatesArizona35.2533-112.13355
Helianthus annuusANN_12ANN09205.341625United StatesArizona35.2533-112.13355
Helianthus annuusANN_13ANN09214.8040875United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09224.7336375United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09235.2283United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09245.02132United StatesArizona34.75056-112.01697
Helianthus annuusANN_13ANN09274.9948875United StatesArizona34.75056-112.01697
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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