Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_59ANN13854.3583125United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13864.3552125United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13874.0412875United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13884.0924625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13894.28445United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13904.3759United StatesTexas26.50251-97.77181
Helianthus annuusANN_60ANN13914.795075United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13924.116025United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13934.8035625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13944.2641625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13954.3028875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13964.770125United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13974.32865United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13984.3509875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13994.8324United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN14004.648175United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN14013.9243United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14024.45345United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14035.0905375United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14044.575725United StatesTexas27.77652-97.66801
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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