Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_57ANN13655.329825United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13665.2039375United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13674.6613625United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13685.1483875United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13694.7914625United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13704.7590875United StatesTexas27.63854-97.24526
Helianthus annuusANN_58ANN13713.9519625United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13724.2360625United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13734.6497625United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13745.1428875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13755.4169875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13764.451525United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13775.3551875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13784.4220875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13794.408475United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13804.808175United StatesTexas28.24166-97.67443
Helianthus annuusANN_59ANN13814.064525United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13823.9811United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13835.12125United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13844.2United StatesTexas26.50251-97.77181
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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