Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_55ANN13414.9252375United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13424.206775United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13434.076675United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13444.0543375United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13454.719175United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13464.3029125United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13474.510225United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13484.402625United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13504.243075United StatesTexas28.66061-96.58348
Helianthus annuusANN_56ANN13514.7281375United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13524.29525United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13534.9098875United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13545.60725United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13555.183625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13564.4245625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13595.0912625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13604.6407625United StatesTexas28.08852-97.06011
Helianthus annuusANN_57ANN13614.0124125United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13635.8201125United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13645.7138375United StatesTexas27.63854-97.24526
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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