Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_52ANN13205.27565United StatesTexas31.13312-104.02012
Helianthus annuusANN_53ANN13214.93166United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13225.5463625United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13234.544275United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13245.5356United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13255.198925United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13265.1131United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13275.3148625United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13284.7299625United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13295.1276125United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13304.7010375United StatesTexas31.03955-103.13683
Helianthus annuusANN_54ANN13314.0827United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13324.5976625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13334.3467United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13344.418725United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13354.732125United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13365.0753United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13384.21235United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13394.7304125United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13404.27065United StatesTexas29.11355-97.39837
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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