Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_37ANN11684.971675United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11695.33545United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11705.4024625United StatesColorado40.48679-105.09619
Helianthus annuusANN_38ANN11715.3781125United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11725.3331875United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11755.1561375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11765.0887875United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11785.775775United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11794.6563United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11805.151975United StatesKansas38.44118-98.63231
Helianthus annuusANN_40ANN11915.786425United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11925.5062625United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11946.0951125United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11966.032625United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11975.744925United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11986.092625United StatesKansas37.23327-98.66459
Helianthus annuusANN_42ANN12115.6592United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12125.6211375United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12134.8226625United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12144.8787875United StatesTexas32.92224-97.36547
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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