Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_35ANN11465.5308125United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11474.9014375United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11485.875575United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11495.927675United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11505.549325United StatesUtah40.51274-109.51947
Helianthus annuusANN_36ANN11515.41955United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11525.708025United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11535.133175United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11545.2420125United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11555.8919United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11564.9087625United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11575.577275United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11584.5611375United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11594.816375United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11605.11505United StatesWyoming41.77426-107.45885
Helianthus annuusANN_37ANN11635.0079United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11645.3267125United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11655.570625United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11665.3145375United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11674.95595United StatesColorado40.48679-105.09619
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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