Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN12155.43375United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12174.5598875United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12184.6093625United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12194.6298625United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12205.202185714United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN12215.264475United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12225.3076125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12234.798825United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12244.781775United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12265.598United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12275.1134625United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12285.3200125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12294.442075United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12304.9585United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN12325.4707625United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12335.0859625United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12354.8575125United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12364.8316875United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12374.726575United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12385.2441625United StatesTexas29.05186-99.01808
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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