Details for Phenotype: Seed curved height (ID: 72)

Phenotype ID:
72
Name:
Seed curved height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Length measured along a curved line through the seed (equidistant from both seed borders)
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN10805.061975United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN10845.34735United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10855.2736875United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10865.07305United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10894.76855United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10905.557675United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10915.4283625United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10924.5950875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10934.860175United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10945.1813125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10955.358525United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10965.05355United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10975.3681125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10984.73405United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11015.6333375United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11035.096425United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11044.5742625United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11055.2110125United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11065.8176625United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11075.1164375United StatesUtah40.1781-111.65071
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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