Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_22ANN10155.8936United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10165.550975United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10175.01436United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10184.7426375United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10194.799525United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10205.6171125United StatesColorado39.00672-108.46384
Helianthus annuusANN_23ANN10215.0733875United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10224.7003375United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10235.4469United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10245.150125United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10255.5840375United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10265.5086375United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10295.181875United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10305.8949375United StatesNevada40.66257-116.23876
Helianthus annuusANN_24ANN10316.0840875United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10326.4426125United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10335.0747United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10345.8102375United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10354.82865United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10366.5471125United StatesNevada39.48892-119.99511
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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