Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_24ANN10374.929175United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10385.3220875United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10395.9676875United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10405.4834875United StatesNevada39.48892-119.99511
Helianthus annuusANN_25ANN10454.2359625United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10465.0244375United StatesNevada36.79654-114.09841
Helianthus annuusANN_26ANN10513.7716375United StatesUtah37.13733-113.51348
Helianthus annuusANN_27ANN10614.4714625United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10624.869675United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10684.3669625United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10695.0231125United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10705.1554125United StatesUtah37.13137-112.56561
Helianthus annuusANN_28ANN10714.7796875United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10724.953United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10735.30225United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10754.6632875United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10765.2586United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10775.4345375United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10785.2877United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10795.1633375United StatesUtah38.21652-112.64767
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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