Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_13ANN09295.1210125United StatesArizona34.75056-112.01697
Helianthus annuusANN_14ANN09314.3100625United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09324.2558375United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09334.8299875United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09344.856425United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09394.1499875United StatesArizona36.1086-111.24184
Helianthus annuusANN_14ANN09404.7215United StatesArizona36.1086-111.24184
Helianthus annuusANN_15ANN09436.0563375United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09445.442475United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09475.4252875United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09485.68325United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09495.5231875United StatesArizona35.03852-110.7351
Helianthus annuusANN_15ANN09505.3736875United StatesArizona35.03852-110.7351
Helianthus annuusANN_16ANN09514.8233375United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09525.3207625United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09535.012525United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09544.8088125United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09555.6316625United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09565.3207625United StatesNew Mexico35.40041-108.23557
Helianthus annuusANN_16ANN09574.9437375United StatesNew Mexico35.40041-108.23557
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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