Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_07ANN08705.742775United StatesCalifornia38.7892-119.9363
Helianthus annuusANN_08ANN08715.52185United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08735.0680875United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08745.058825United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08766.0827875United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08775.4187United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08785.6118125United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08796.085425United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_08ANN08805.2771375United StatesCalifornia38.67722-119.73895
Helianthus annuusANN_09ANN08814.27435United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08824.2981625United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08834.5481875United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08843.7689875United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08854.6606375United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08863.7332875United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08874.50055United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08884.644775United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_09ANN08894.4489625United StatesCalifornia37.43321-118.40646
Helianthus annuusANN_10ANN08914.02035United StatesCalifornia37.17346-118.27904
Helianthus annuusANN_10ANN08924.6381375United StatesCalifornia37.17346-118.27904
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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