Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_59ANN13854.1672United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13864.17115United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13873.8880375United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13883.9290625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13894.11955United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13904.2082125United StatesTexas26.50251-97.77181
Helianthus annuusANN_60ANN13914.6236United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13923.9595United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13934.6579875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13944.11955United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13954.1724625United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13964.6288875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13974.1566125United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13984.159225United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13994.6725375United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN14004.520425United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN14013.754425United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14024.3074375United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14034.9741625United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14044.3695875United StatesTexas27.77652-97.66801
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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