Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_57ANN13655.2149375United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13665.101175United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13674.504525United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13685.040325United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13694.6513875United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13704.5773125United StatesTexas27.63854-97.24526
Helianthus annuusANN_58ANN13713.8086875United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13724.0812125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13734.4794United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13745.011225United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13755.3062375United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13764.275675United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13775.249325United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13784.241275United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13794.2029125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13804.6526875United StatesTexas28.24166-97.67443
Helianthus annuusANN_59ANN13813.952875United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13823.8602875United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13835.009875United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13844.01505United StatesTexas26.50251-97.77181
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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