Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_52ANN13205.1593625United StatesTexas31.13312-104.02012
Helianthus annuusANN_53ANN13214.79214United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13225.445125United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13234.386775United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13245.4292625United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13255.056175United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13264.9874United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13275.213625United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13284.59185United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13294.9860875United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13304.538925United StatesTexas31.03955-103.13683
Helianthus annuusANN_54ANN13313.903925United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13324.4344375United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13334.197625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13344.284925United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13354.6077125United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13364.9490375United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13384.045475United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13394.568025United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13404.11955United StatesTexas29.11355-97.39837
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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