Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_47ANN12635.0813125United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12644.5825625United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12654.4846875United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12665.577425United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12674.2227625United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12684.239975United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12695.254625United StatesArizona32.73158-111.53769
Helianthus annuusANN_47ANN12704.5336375United StatesArizona32.73158-111.53769
Helianthus annuusANN_50ANN12915.6978United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12924.8379United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN12945.1170375United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_50ANN13004.8776United StatesNew Mexico32.17943-108.38541
Helianthus annuusANN_51ANN13025.121United StatesNew Mexico32.12876-106.67373
Helianthus annuusANN_52ANN13115.1964United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13144.78235United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13155.5642United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13164.7333875United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13174.7148875United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13185.277125United StatesTexas31.13312-104.02012
Helianthus annuusANN_52ANN13194.4767375United StatesTexas31.13312-104.02012
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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