Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_37ANN11684.833925United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11695.254625United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11705.3168United StatesColorado40.48679-105.09619
Helianthus annuusANN_38ANN11715.2731375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11725.259925United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11755.0297375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11764.9662375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11785.666075United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11794.4926375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11805.0165United StatesKansas38.44118-98.63231
Helianthus annuusANN_40ANN11915.709725United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11925.4094125United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11945.969United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11965.93065United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11975.660775United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11985.9769375United StatesKansas37.23327-98.66459
Helianthus annuusANN_42ANN12115.54965United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12125.5178875United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12134.6818United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12144.7215United StatesTexas32.92224-97.36547
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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