Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_42ANN12155.3287United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12174.3934United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12184.4159United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12194.4397125United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12205.08United StatesTexas32.92224-97.36547
Helianthus annuusANN_43ANN12215.172625United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12225.1792125United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12234.68975United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12244.628875United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12265.4861375United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12274.96755United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12285.2440375United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12294.2942United StatesTexas29.73315-97.65574
Helianthus annuusANN_43ANN12304.8604United StatesTexas29.73315-97.65574
Helianthus annuusANN_44ANN12325.3564875United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12334.9715125United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12354.718825United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12364.66195United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12374.5230375United StatesTexas29.05186-99.01808
Helianthus annuusANN_44ANN12385.1104375United StatesTexas29.05186-99.01808
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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