Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_35ANN11465.4451125United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11474.7730875United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11485.802325United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11495.8327375United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11505.48215United StatesUtah40.51274-109.51947
Helianthus annuusANN_36ANN11515.323425United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11525.6237United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11535.03105United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11545.150125United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11555.7718875United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11564.794275United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11575.464975United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11584.377525United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11594.695025United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11604.97815United StatesWyoming41.77426-107.45885
Helianthus annuusANN_37ANN11634.898775United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11645.1977375United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11655.4610125United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11665.173925United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11674.7889625United StatesColorado40.48679-105.09619
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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