Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_31ANN11095.74675United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11105.396175United StatesUtah40.1781-111.65071
Helianthus annuusANN_32ANN11154.84585United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11165.2466875United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11174.613United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11185.05355United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11194.85115United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11204.7175125United StatesUtah41.48524-112.0556
Helianthus annuusANN_33ANN11235.2440375United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11244.6699125United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11294.9874United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11305.2850625United StatesUtah40.77115-112.15004
Helianthus annuusANN_34ANN11335.525825United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11354.9728375United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11364.7916125United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11375.234775United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11384.685775United StatesUtah40.69149-112.26423
Helianthus annuusANN_35ANN11435.468925United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11445.3472375United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11455.27315United StatesUtah40.51274-109.51947
Publications
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Contact Information
Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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