Details for Phenotype: Seed maximum height (ID: 71)

Phenotype ID:
71
Name:
Seed maximum height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed length
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN10804.93315United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN10845.2294875United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10855.151425United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10865.0019375United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10894.6156375United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10905.45835United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10915.267875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10924.4225125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10934.7373625United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10945.10515United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10955.2361125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10964.9133125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10975.2665375United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10984.5786125United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11015.513925United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11034.971525United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11044.4172United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11055.0919125United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11065.716325United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11074.99535United StatesUtah40.1781-111.65071
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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