Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_59ANN13852.3111375United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13862.4156625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13871.9883625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13882.2727625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13892.264825United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13902.3600875United StatesTexas26.50251-97.77181
Helianthus annuusANN_60ANN13912.8509United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13922.3494875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13932.66305United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13942.381225United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13952.2674875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13962.5611875United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13972.33495United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13982.81915United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN13992.8403United StatesTexas27.28522-97.66729
Helianthus annuusANN_60ANN14002.5148875United StatesTexas27.28522-97.66729
Helianthus annuusANN_61ANN14012.387875United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14022.5664625United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14032.8720625United StatesTexas27.77652-97.66801
Helianthus annuusANN_61ANN14042.883975United StatesTexas27.77652-97.66801
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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