Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_57ANN13652.652475United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13662.8363375United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13672.4778375United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13682.6154United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13692.18545United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13702.71595United StatesTexas27.63854-97.24526
Helianthus annuusANN_58ANN13712.5797United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13722.55455United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13732.3627375United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13742.6551125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13752.4884125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13762.3005625United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13772.7675375United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13782.795325United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13792.7424125United StatesTexas28.24166-97.67443
Helianthus annuusANN_58ANN13802.604825United StatesTexas28.24166-97.67443
Helianthus annuusANN_59ANN13812.1854625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13822.1338625United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13832.698775United StatesTexas26.50251-97.77181
Helianthus annuusANN_59ANN13842.4209375United StatesTexas26.50251-97.77181
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
Germany

dominik.grimm [at] hswt.de

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