Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_55ANN13412.599525United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13422.5360375United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13432.7900375United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13442.5373625United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13452.950125United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13462.4050875United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13472.6326125United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13482.243675United StatesTexas28.66061-96.58348
Helianthus annuusANN_55ANN13502.33495United StatesTexas28.66061-96.58348
Helianthus annuusANN_56ANN13512.8191625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13522.6934625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13532.8734United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13543.18295United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13552.710675United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13562.3455375United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13592.4116625United StatesTexas28.08852-97.06011
Helianthus annuusANN_56ANN13602.7013875United StatesTexas28.08852-97.06011
Helianthus annuusANN_57ANN13612.399775United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13632.8482375United StatesTexas27.63854-97.24526
Helianthus annuusANN_57ANN13642.6352625United StatesTexas27.63854-97.24526
Publications
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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dominik.grimm [at] hswt.de

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