Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_52ANN13202.8072375United StatesTexas31.13312-104.02012
Helianthus annuusANN_53ANN13212.4532United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13222.780775United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13232.336275United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13242.521475United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13252.733125United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13262.6087875United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13272.7265375United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13282.61145United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13292.4937United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13302.5453United StatesTexas31.03955-103.13683
Helianthus annuusANN_54ANN13312.1881United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13322.443425United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13332.5492625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13342.6193875United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13352.6273125United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13363.25835United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13382.5717625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13392.4169625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13402.4315125United StatesTexas29.11355-97.39837
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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93415 Straubing
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dominik.grimm [at] hswt.de

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