Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_35ANN11463.17765United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11472.817825United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11482.942175United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11492.9884625United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11503.0228625United StatesUtah40.51274-109.51947
Helianthus annuusANN_36ANN11513.3562375United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11522.9262875United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11532.6736375United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11542.6498United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11553.319225United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11562.457975United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11572.870725United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11582.3508375United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11592.81915United StatesWyoming41.77426-107.45885
Helianthus annuusANN_36ANN11602.7080125United StatesWyoming41.77426-107.45885
Helianthus annuusANN_37ANN11632.431525United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11642.8919125United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11653.15385United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11662.751675United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11672.416975United StatesColorado40.48679-105.09619
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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