Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_31ANN11093.051975United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11102.7331625United StatesUtah40.1781-111.65071
Helianthus annuusANN_32ANN11152.616725United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11162.7715United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11172.94085United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11182.8019375United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11192.787375United StatesUtah41.48524-112.0556
Helianthus annuusANN_32ANN11202.7834125United StatesUtah41.48524-112.0556
Helianthus annuusANN_33ANN11233.20675United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11242.844275United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11293.03345United StatesUtah40.77115-112.15004
Helianthus annuusANN_33ANN11303.1882375United StatesUtah40.77115-112.15004
Helianthus annuusANN_34ANN11333.1961625United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11352.948775United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11362.83635United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11373.157825United StatesUtah40.69149-112.26423
Helianthus annuusANN_34ANN11382.72655United StatesUtah40.69149-112.26423
Helianthus annuusANN_35ANN11433.325825United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11443.005675United StatesUtah40.51274-109.51947
Helianthus annuusANN_35ANN11453.3694625United StatesUtah40.51274-109.51947
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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