Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_37ANN11682.8535375United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11692.6511125United StatesColorado40.48679-105.09619
Helianthus annuusANN_37ANN11702.827075United StatesColorado40.48679-105.09619
Helianthus annuusANN_38ANN11713.209375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11722.9792125United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11752.7992875United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11762.6961125United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11783.0453625United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11792.5426375United StatesKansas38.44118-98.63231
Helianthus annuusANN_38ANN11802.696125United StatesKansas38.44118-98.63231
Helianthus annuusANN_40ANN11913.2438United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11923.1300375United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11943.283475United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11963.071825United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11973.081075United StatesKansas37.23327-98.66459
Helianthus annuusANN_40ANN11983.1472125United StatesKansas37.23327-98.66459
Helianthus annuusANN_42ANN12113.0705United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12123.1459United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12132.8985United StatesTexas32.92224-97.36547
Helianthus annuusANN_42ANN12142.772825United StatesTexas32.92224-97.36547
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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