Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_28ANN10802.821775United StatesUtah38.21652-112.64767
Helianthus annuusANN_29ANN10842.9487875United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10852.87205United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10862.6895United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10892.70935United StatesUtah39.55006-112.35661
Helianthus annuusANN_29ANN10902.9607United StatesUtah39.55006-112.35661
Helianthus annuusANN_30ANN10912.6921375United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10922.7424United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10932.7662125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10942.9170375United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10952.5558875United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10962.3905125United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10972.8112United StatesUtah39.7148-112.20662
Helianthus annuusANN_30ANN10982.6617United StatesUtah39.7148-112.20662
Helianthus annuusANN_31ANN11013.062575United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11033.3482875United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11042.624675United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11052.304525United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11063.2226125United StatesUtah40.1781-111.65071
Helianthus annuusANN_31ANN11072.596875United StatesUtah40.1781-111.65071
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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