Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_24ANN10372.6537875United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10382.919675United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10392.9937625United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10402.700075United StatesNevada39.48892-119.99511
Helianthus annuusANN_25ANN10452.268825United StatesNevada36.79654-114.09841
Helianthus annuusANN_25ANN10462.8548625United StatesNevada36.79654-114.09841
Helianthus annuusANN_26ANN10512.182825United StatesUtah37.13733-113.51348
Helianthus annuusANN_27ANN10612.587625United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10622.5148875United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10682.7702United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10692.820475United StatesUtah37.13137-112.56561
Helianthus annuusANN_27ANN10703.020225United StatesUtah37.13137-112.56561
Helianthus annuusANN_28ANN10713.0546125United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10722.981875United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10733.0122875United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10752.7212375United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10762.68685United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10773.0956125United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10783.0189125United StatesUtah38.21652-112.64767
Helianthus annuusANN_28ANN10793.1128United StatesUtah38.21652-112.64767
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
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93415 Straubing
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dominik.grimm [at] hswt.de

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