Details for Phenotype: Seed maximum width (ID: 69)

Phenotype ID:
69
Name:
Seed maximum width
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Maximum width of the seed
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_22ANN10153.0466875United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10162.763575United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10173.06068United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10182.99905United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10192.4566625United StatesColorado39.00672-108.46384
Helianthus annuusANN_22ANN10203.1697375United StatesColorado39.00672-108.46384
Helianthus annuusANN_23ANN10212.7093125United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10222.7172875United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10233.169716667United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10242.6154United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10253.009625United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10262.75695United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10292.9355625United StatesNevada40.66257-116.23876
Helianthus annuusANN_23ANN10303.0731375United StatesNevada40.66257-116.23876
Helianthus annuusANN_24ANN10312.7556375United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10323.078425United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10332.856175United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10343.1684United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10352.87735United StatesNevada39.48892-119.99511
Helianthus annuusANN_24ANN10362.98185United StatesNevada39.48892-119.99511
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
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dominik.grimm [at] hswt.de

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