Details for Phenotype: Seed width mid height (ID: 68)

Phenotype ID:
68
Name:
Seed width mid height
Species:
Helianthus annuus
Species NCBI-ID:
4232
Category:
Seed traits
Sub-Category:
Seed size
Type:
Quantitative
Ontology:
seed width
Unit:
cm
#Samples:
426
#Populations:
58
GWAS Results in easyGWAS
easyGWAS results
Phenotype Description
Width measured at 1/2 of the seed's length
Phenotype Scoring
At least three inflorescences for each plant were bagged before anthesis and manually crossed to another individual from the same population of origin. Seeds were let to dry on the plant, collected, cleaned and store in an hermetically sealed box containing silica gel. Eigth seeds from each plant were imaged using a high resolution scanner, at a resolution of 2400 dpi. A size and colour standard was included in each picture. Images were analyed using Tomato Analyzer (Rodrigues. et al. 2010); object boundaries in Tomato Analyzer were manually adjusted to exclude seed hair.

Population Map (58 Populations with 426 Individuals)

TaxaPopulation IDIndividual IDPhenotype ValueCountrySitenameLatitudeLongitude
Helianthus annuusANN_52ANN13202.677575United StatesTexas31.13312-104.02012
Helianthus annuusANN_53ANN13212.30718United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13222.6154United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13232.24105United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13242.3931625United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13252.64055United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13262.4249United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13272.6114375United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13282.5069375United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13292.327025United StatesTexas31.03955-103.13683
Helianthus annuusANN_53ANN13302.4209375United StatesTexas31.03955-103.13683
Helianthus annuusANN_54ANN13312.099475United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13322.3468625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13332.457975United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13342.5095625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13352.514875United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13363.1379625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13382.4765United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13392.333625United StatesTexas29.11355-97.39837
Helianthus annuusANN_54ANN13402.3177625United StatesTexas29.11355-97.39837
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Prof. Dr. Dominik Grimm
Professorship of Bioinformatics

TUM Campus Straubing for Biotechnology and Sustainability (TUMCS)
Weihenstephan-Triesdorf University of Applied Sciences (HSWT)
Petersgasse 18
93415 Straubing
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dominik.grimm [at] hswt.de

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